#protein-structure (14 Repositories)
Ranked open-source repositories tagged with #protein-structure, scored by pull request acceptance likelihood and maintainer engagement velocity.
35.8%
45.6h
14 repositories tagged #protein-structure
BradyAJohnston/MolecularNodes
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
RosettaCommons/rosetta
The Rosetta Bio-macromolecule modeling package. Available through license with the University of Washington.
JuliaMolSim/Molly.jl
Molecular simulation in Julia
biojava/biojava
:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.
steineggerlab/foldseek
Foldseek enables fast and sensitive comparisons of large structure sets.
biopython/biopython
Official git repository for Biopython (originally converted from CVS)
rcedgar/muscle
Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.
BioJulia/BioStructures.jl
A Julia package to read, write and manipulate macromolecular structures
sokrypton/ColabFold
Making Protein folding accessible to all!
steineggerlab/folddisco
Fast indexing and search of discontinuous motifs in protein structures
aqlaboratory/proteinnet
Standardized data set for machine learning of protein structure
williamgilpin/pypdb
A Python API for the RCSB Protein Data Bank (PDB)
rdk/p2rank
P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
jwohlwend/boltz
Official repository for the Boltz biomolecular interaction models