#bioinformatics-pipeline (11 Repositories)
Ranked open-source repositories tagged with #bioinformatics-pipeline, scored by pull request acceptance likelihood and maintainer engagement velocity.
36.2%
10.2h
11 repositories tagged #bioinformatics-pipeline
GuyTeichman/RNAlysis
Analyze your RNA sequencing data without writing a single line of code
stjude-rust-labs/sprocket
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
bacalhau-project/bacalhau
Community-driven, simple, yet powerful framework for fast, cost-effective distributed Compute over Data.
KarchinLab/open-cravat
A modular annotation tool for genomic variants
saketkc/pysradb
Package for fetching metadata and downloading data from SRA/ENA/GEO
algbio/ggcat
Compacted and colored de Bruijn graph construction and querying
sanger-pathogens/Roary
Rapid large-scale prokaryote pan genome analysis
r3fang/SnapATAC
Analysis Pipeline for Single Cell ATAC-seq
ngless-toolkit/ngless
NGLess: NGS with less work
GregorySchwartz/too-many-cells
Cluster single cells and analyze cell clade relationships with colorful visualizations.
grailbio/reflow
A language and runtime for distributed, incremental data processing in the cloud