#transcriptomics (10 Repositories)
Ranked open-source repositories tagged with #transcriptomics, scored by pull request acceptance likelihood and maintainer engagement velocity.
18.9%
13.9h
10 repositories tagged #transcriptomics
GuyTeichman/RNAlysis
Analyze your RNA sequencing data without writing a single line of code
COMBINE-lab/alevin-fry
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
lilab-bcb/cirrocumulus
Bring your single-cell data to life
ablab/IsoQuant
A universal toolkit for upstream processing of long RNA reads
scverse/decoupler
Python package to perform enrichment analysis from omics data.
ZJUFanLab/scCATCH
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
GoekeLab/xpore
Identification of differential RNA modifications from nanopore direct RNA sequencing
obophenotype/cell-ontology
An ontology of cell types
iSEE/iSEE
R/shiny interface for interactive visualization of data in SummarizedExperiment objects
GoekeLab/bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data