#taxonomy (14 Repositories)
Ranked open-source repositories tagged with #taxonomy, scored by pull request acceptance likelihood and maintainer engagement velocity.
65.1%
23.1h
14 repositories tagged #taxonomy
sequana/sequana
Sequana: a set of Snakemake NGS pipelines
wp-cli/entity-command
Manage WordPress comments, menus, options, posts, sites, terms, and users.
SpeciesFileGroup/taxonworks
Workbench for biodiversity informatics.
soedinglab/MMseqs2
MMseqs2: ultra fast and sensitive search and clustering suite
MISP/misp-taxonomies
Taxonomies used in MISP taxonomy system and can be used by other information sharing tool.
ropensci/rfishbase
R interface to the fishbase.org database
bugcrowd/vulnerability-rating-taxonomy
Bugcrowd’s baseline priority ratings for common security vulnerabilities
ropensci/taxize
A taxonomic toolbelt for R
shenwei356/taxonkit
A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV
steineggerlab/Metabuli
Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
electric-capital/open-dev-data
A taxonomy for open source cryptocurrency, blockchain, and decentralized ecosystems
rinvex/laravel-categories
Rinvex Categorizable is a polymorphic Laravel package, for category management. You can categorize any eloquent model with ease, and utilize the power of Nested Sets, and the awesomeness of Sluggable, and Translatable models out of the box.
bioinformatics-centre/kaiju
Fast taxonomic classification of metagenomic sequencing reads using a protein reference database
benjjneb/dada2
Accurate sample inference from amplicon data with single nucleotide resolution