Back to Topics Directory

Topic Hub

#structural-variation (4 Repositories)

Ranked open-source repositories tagged with #structural-variation, scored by pull request acceptance likelihood and maintainer engagement velocity.

Topic Avg Merge Rate

60.8%

Avg Review Latency

78.3h

Filter by language

Rankings/rankings/python /rankings/r /rankings/cpp

4 repositories tagged #structural-variation

B TierPython 295

tjiangHIT/cuteSV

Long read based human genomic structural variation detection with cuteSV

100.0%

Merge Rate

-

First Review

100%

1st-Timers

0

Maintainers

B TierR 275

cgroza/GraffiTE

GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.

83.3%

Merge Rate

6d

First Review

100%

1st-Timers

0

Maintainers

B TierPython 205

broadinstitute/gatk-sv

A structural variation pipeline for short-read sequencing

60.0%

Merge Rate

7d

First Review

100%

1st-Timers

2

Maintainers

D TierC++ 537

dellytools/delly

DELLY2: Structural variant discovery by integrated paired-end and split-read analysis

0.0%

Merge Rate

-

First Review

0%

1st-Timers

0

Maintainers