#scrna-seq (10 Repositories)
Ranked open-source repositories tagged with #scrna-seq, scored by pull request acceptance likelihood and maintainer engagement velocity.
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10 repositories tagged #scrna-seq
COMBINE-lab/salmon
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
lilab-bcb/cirrocumulus
Bring your single-cell data to life
junjunlab/scRNAtoolVis
Useful functions to make your scRNA-seq plot more cool!
scverse/muon
muon is a multimodal omics Python framework
scRNA-tools/scRNA-tools
Table of software for the analysis of single-cell RNA-seq data.
theislab/zellkonverter
Conversion between scRNA-seq objects
liulab-dfci/MAESTRO
Single-cell Transcriptome and Regulome Analysis Pipeline
Oshlack/splatter
Simple simulation of single-cell RNA sequencing data
samuel-marsh/scCustomize
R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
kharchenkolab/conos
R package for the joint analysis of multiple single-cell RNA-seq datasets