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#scanpy (7 Repositories)

Ranked open-source repositories tagged with #scanpy, scored by pull request acceptance likelihood and maintainer engagement velocity.

Topic Avg Merge Rate

52.2%

Avg Review Latency

67.9h

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7 repositories tagged #scanpy

A TierPython 151

theislab/anndata2ri

Convert between AnnData and SingleCellExperiment

100.0%
Merge Rate
12h
First Review
100%
1st-Timers
1
Maintainers
A TierPython 772 1 GFIs

scverse/anndata

Annotated data.

82.1%
Merge Rate
4d
First Review
60%
1st-Timers
13
Maintainers
A TierPython 2.5k

scverse/scanpy

Single-cell analysis in Python. Scales to >100M cells.

80.3%
Merge Rate
8d
First Review
55%
1st-Timers
16
Maintainers
B TierPython 657

cafferychen777/mLLMCelltype

Cell type annotation for single-cell RNA-seq using multi-LLM consensus

66.7%
Merge Rate
1h
First Review
100%
1st-Timers
1
Maintainers
B TierPython 278

scverse/muon

muon is a multimodal omics Python framework

25.0%
Merge Rate
2d
First Review
0%
1st-Timers
2
Maintainers
C TierJavaScript 101

lilab-bcb/cirrocumulus

Bring your single-cell data to life

11.1%
Merge Rate
6d
First Review
0%
1st-Timers
1
Maintainers
D TierR 679

zhanghao-njmu/SCP

An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

0.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers
Best Scanpy Open Source Repositories & C-Rank™ | GetMerged