Topic Hub
#pacbio (7 Repositories)
Ranked open-source repositories tagged with #pacbio, scored by pull request acceptance likelihood and maintainer engagement velocity.
Topic Avg Merge Rate
29.0%
Avg Review Latency
25.1h
Filter by language
7 repositories tagged #pacbio
B TierPython 392
HKU-BAL/Clair3
Clair3 - Symphonizing pileup and full-alignment for deep learning-based long-read variant calling
75.0%
Merge Rate
1h
First Review
100%
1st-Timers
4
Maintainers
A TierPython 151
sequana/sequana
Sequana: a set of Snakemake NGS pipelines
72.7%
Merge Rate
<1h
First Review
50%
1st-Timers
2
Maintainers
B TierPython 234
ablab/IsoQuant
A universal toolkit for upstream processing of long RNA reads
55.6%
Merge Rate
7d
First Review
100%
1st-Timers
1
Maintainers
D TierC 332
marbl/Winnowmap
Long read / genome alignment software
0.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers
D TierC++ 310
philres/ngmlr
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
0.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers
D TierC 407
Nextomics/NextDenovo
Fast and accurate de novo assembler for long reads
0.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers
D TierC++ 816
chhylp123/hifiasm
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
0.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers