#ngs (15 Repositories)
Ranked open-source repositories tagged with #ngs, scored by pull request acceptance likelihood and maintainer engagement velocity.
52.5%
21.4h
15 repositories tagged #ngs
galaxyproject/training-material
A collection of Galaxy-related training material
samtools/htslib
C library for high-throughput sequencing data formats
galaxyproject/galaxy
Data intensive science for everyone.
epam/cloud-pipeline
Cloud agnostic genomics analysis, scientific computation and storage platform
broadinstitute/gatk
Official code repository for GATK versions 4 and up
sequana/sequana
Sequana: a set of Snakemake NGS pipelines
samtools/htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
ugeneunipro/ugene
UGENE is free open-source cross-platform bioinformatics software
aidenlab/juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
telatin/seqfu2
:rocket: seqfu - Sequece Fastx Utilities
ablab/IsoQuant
A universal toolkit for upstream processing of long RNA reads
fulcrumgenomics/fgbio
Tools for working with genomic and high throughput sequencing data.
google/deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
ngless-toolkit/ngless
NGLess: NGS with less work
BioOmics/iSeq
Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.