#neuroscience (30 Repositories)
Ranked open-source repositories tagged with #neuroscience, scored by pull request acceptance likelihood and maintainer engagement velocity.
60.7%
138.3h
30 repositories tagged #neuroscience
facebookresearch/neuroai
Python suite for neuroscience research across all modalities.
mne-tools/mne-python
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
braindecode/braindecode
Deep learning software to decode EEG, ECG or MEG signals
SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
mne-tools/mne-bids-pipeline
Automatically process entire electrophysiological datasets using MNE-Python.
mne-tools/mne-bids
MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
jeshraghian/snntorch
Deep and online learning with spiking neural networks in Python
OpenNeuroOrg/openneuro
A free and open platform for analyzing and sharing neuroimaging data
neuronsimulator/nrn
NEURON Simulator
brainglobe/brainrender
A Python package to visualise neuroanatomical data in atlas space
brainglobe/cellfinder
Automated 3D cell detection in very large images
PytorchConnectomics/pytorch_connectomics
PyTorch Connectomics: segmentation toolbox for EM connectomics
sappelhoff/pyprep
PyPREP: A Python implementation of the Preprocessing Pipeline (PREP) for EEG data
samvallad33/vestige
Think before doing, prove before saving. Vestige is a local, deterministic safety kernel for AI agents. Every memory write and agent action is recorded in Strata, a signed, append-only log, so you can see exactly what your agent did and why.
waltsims/k-wave-python
A Python interface to k-Wave GPU accelerated binaries
janelia-flyem/dvid
Distributed, Versioned, Image-oriented Dataservice
NACLab/ngc-learn
NGC-Learn: Computational Neuroscience and NeuroAI in Python
AllenInstitute/bmtk
Brain Modeling Toolkit
navis-org/navis
Python library for analysis of neuroanatomical data.
Washington-University/workbench
Connectome Workbench
mne-tools/mne-cpp
MNE-CPP: The C++ framework for real-time functional brain imaging.
JATOS/JATOS
Just Another Tool for Online Studies
ppsp-team/HyPyP
The Hyperscanning Python Pipeline
BioDynaMo/biodynamo
BioDynaMo is a high-performance and modular, agent-based simulation platform.
rordenlab/dcm2niix
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
arbor-sim/arbor
The Arbor multi-compartment neural network simulation library.
muellerberndt/cadence
A brain that learns from live experience. System 1 by default: perception, memory, plasticity and action. Optional System 2 for self-observation and slow corrections.
Emotiv/cortex-example
Example with Cortex V2/V3/V4 API
wmayner/pyphi
A toolbox for integrated information theory.
expyriment/expyriment
Platform-independent lightweight Python library for designing and conducting timing-critical behavioural and neuroimaging experiments