Topic Hub
#gene-expression (5 Repositories)
Ranked open-source repositories tagged with #gene-expression, scored by pull request acceptance likelihood and maintainer engagement velocity.
Topic Avg Merge Rate
69.1%
Avg Review Latency
33.3h
Filter by language
5 repositories tagged #gene-expression
S TierPython 229
helicalAI/helical
A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.
79.3%
Merge Rate
<1h
First Review
75%
1st-Timers
5
Maintainers
A TierRust 936
COMBINE-lab/salmon
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
66.1%
Merge Rate
-
First Review
100%
1st-Timers
2
Maintainers
B TierR 391
junjunlab/ClusterGVis
One-step to Cluster and Visualize Gene Expression Matrix
100.0%
Merge Rate
7d
First Review
0%
1st-Timers
0
Maintainers
B TierR 231
iSEE/iSEE
R/shiny interface for interactive visualization of data in SummarizedExperiment objects
100.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers
D TierR 681
saeyslab/nichenetr
NicheNet: predict active ligand-target links between interacting cells
0.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers