#fasta (14 Repositories)
Ranked open-source repositories tagged with #fasta, scored by pull request acceptance likelihood and maintainer engagement velocity.
48.1%
7.3h
14 repositories tagged #fasta
samtools/htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
Gabaldonlab/redundans
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
telatin/seqfu2
:rocket: seqfu - Sequece Fastx Utilities
mbhall88/rasusa
Randomly subsample sequencing reads or alignments
mdshw5/pyfaidx
Efficient pythonic random access to fasta subsequences
shenwei356/seqkit
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
lmdu/pyfastx
a python package for fast random access to sequences from plain and gzipped FASTA/Q files
torognes/swarm
A robust and fast clustering method for amplicon-based studies
torognes/vsearch
Versatile open-source tool for microbiome analysis
bebop/poly
A Go package for engineering organisms.
bioSyntax/bioSyntax
Syntax highlighting for computational biology
edgardomortiz/vcf2phylip
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
igordot/genomics
A collection of scripts and notes related to genomics and bioinformatics
seqan/seqan3
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.