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#computational-biology (12 Repositories)

Ranked open-source repositories tagged with #computational-biology, scored by pull request acceptance likelihood and maintainer engagement velocity.

Topic Avg Merge Rate

51.8%

Avg Review Latency

26.0h

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12 repositories tagged #computational-biology

B TierPython 167

OpenBioSim/biosimspace

An interoperable Python framework for biomolecular simulation.

100.0%
Merge Rate
<1h
First Review
100%
1st-Timers
1
Maintainers
S TierHTML 1.0k

xuzhougeng/wisp-science

Open-source, local-first desktop AI research workbench for scientific computing with Python/R, MCP bioinformatics tools, SSH/WSL/GPU runtimes, and OpenAI/Anthropic models.

95.7%
Merge Rate
2d
First Review
86%
1st-Timers
4
Maintainers
B TierPython 153

inoue0426/awesome-computational-biology

Awesome list of computational biology.

90.5%
Merge Rate
8h
First Review
100%
1st-Timers
1
Maintainers
B TierPython 118

RMeli/spyrmsd

📐 Symmetry-corrected RMSD in Python

100.0%
Merge Rate
5h
First Review
100%
1st-Timers
0
Maintainers
A TierC++ 1.1k

opensim-org/opensim-core

SimTK OpenSim C++ libraries and command-line applications, and Java/Python wrapping.

71.6%
Merge Rate
5h
First Review
60%
1st-Timers
16
Maintainers
B TierPython 1.2k

scikit-bio/scikit-bio

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

63.3%
Merge Rate
16h
First Review
50%
1st-Timers
21
Maintainers
B TierC++ 142

rcedgar/usearch12

Open-source usearch

100.0%
Merge Rate
10d
First Review
0%
1st-Timers
0
Maintainers
B TierGo 732

bebop/poly

A Go package for engineering organisms.

0.0%
Merge Rate
-
First Review
0%
1st-Timers
1
Maintainers
D TierMulti-language 993

eselkin/awesome-computational-neuroscience

A list of schools and researchers in computational neuroscience

0.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers
D TierHTML 467

OATML-Markslab/ProteinGym

Official repository for the ProteinGym benchmarks

0.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers
D TierShell 273

bioSyntax/bioSyntax

Syntax highlighting for computational biology

0.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers
D TierR 300

oncologylab/craftgrn

Combined RNA and ATAC Footprint Training of Gene Regulatory Network

0.0%
Merge Rate
-
First Review
0%
1st-Timers
0
Maintainers
Best Computational-biology Open Source Repositories & C-Rank™ | GetMerged